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KMID : 0364820230590010045
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Korean Journal of Microbiology
2023 Volume.59 No. 1 p.45 ~ p.48
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Complete genome sequence of Paenibacillus sp. YPD9-1 isolated from the gut microbiome of Hexagrammos agrammus
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Kim Dong-Gyun
Jung Hyun-Kyoung
Park Jung-Wook
Kim Young-Ok
Kong Hee-Jeong
Kim Young-Sam
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Abstract
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Paenibacillus sp. YPD9-1, a novel bacterium showing antifungal activity was isolated from a gut content of a spotty belly greenling Hexagrammos agrammus. The genome sequence of strain YPD9-1 which is 6,569,197 bp with 47.6% G + C content was obtained by using Nanopore platform. The complete genome contains total 6,165 genes including 5,998 CDSs, 42 RNAs, 121 tRNAs, and 524 pseudogenes. Additionally, gene clusters encoding secondary metabolites such as antimicrobial and beneficial substances, macrobrevin, paeninodin, and ectoine were identified from the genome. The findings might provide insight into the characteristics of Paenibacillus species and the industrial application of their property.
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KEYWORD
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Paenibacillus sp., complete genome, spotty belly greenling
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